Protein Alignment oc and shox

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 187
• Identity: 62/187 - (33%)
• Similarity: 89/187 - (47%)
• Gaps: 46/187 - (24%)

  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQ 130
            ||||.||.||..||:.||.||.:|.|||.|||||::.::.|.|:||||||:|||||||:|..|..
Zfish   108 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMH 172

  Fly   131 QSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQ 195
            :...|.::.:.      ::|..:.      ..|.|:.              :...:|..:|...:
Zfish   173 KGVILGTASHL------DACRVAP------YVNMGAL--------------RMPFQQVQAQLQLE 211

  Fly   196 GGGSSGGNNSNNNSAAAA--------------------ASAAAAVAAAQSIKTHHSS 232
            |.|:....:.:.:.||.|                    |||||||.||....:.:||
Zfish   212 GVGTHSHPHLHPHLAAHAPYLMFPPPPFGLPIASLADSASAAAAVVAAAKSNSKNSS 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	34/54 (63%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	23/36 (64%)
		Homeodomain	110..166	CDD:459649	35/55 (64%)