DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Rhox10

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001032670.1 Gene:Rhox10 / 652926 RGDID:1563291 Length:201 Species:Rattus norvegicus


Alignment Length:78 Identity:30/78 - (38%)
Similarity:49/78 - (62%) Gaps:2/78 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQ 127
            |.|:.:..:  ||.|||..||..|.:|:|||...|:.:|..|::.|.:|:.||||:|||.|::.:
  Rat    90 NNRQIKHHK--FTYAQLCELEKAFQETQYPDAHRRKALAALIHVDECKVKAWFKNKRAKYRKKHK 152

  Fly   128 QQQQSNSLSSSKN 140
            :...|::.|.:.|
  Rat   153 ELLLSSATSGTLN 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 24/54 (44%)
Rhox10NP_001032670.1 Homeodomain 99..149 CDD:459649 24/49 (49%)

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