DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and SHOX

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:80 Identity:42/80 - (52%)
Similarity:55/80 - (68%) Gaps:0/80 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 125
            |....||||.||.||..||:.||.||.:|.|||.|||||::.::.|.|:||||||:|||||||:|
Human   111 GQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 175

  Fly   126 LQQQQQSNSLSSSKN 140
            ..|..:...|.::.:
Human   176 ENQMHKGVILGTANH 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 34/54 (63%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 3/7 (43%)
Homeodomain 118..174 CDD:459649 35/55 (64%)
SH3-binding. /evidence=ECO:0000255 242..249
OAR 272..288 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287
Blue background indicates that the domain is not in the aligned region.

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