Protein Alignment oc and gsc

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001016704.1
• Gene: gsc / 549458
• XenbaseID: XB-GENE-486771
• Length: 243
• Species: Xenopus tropicalis
• Alignment Length: 186
• Identity: 55/186 - (29%)
• Similarity: 84/186 - (45%)
• Gaps: 61/186 - (32%)

  Fly    13 PHPHSYGG-------PHPHHSVPHGPLPPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRE 70
            |...:|.|       |.||..:|:      |.:.:|....|          |.:..::.|::||.
 Frog   103 PPATAYDGAGSVLMPPVPHQMLPY------MNVGTLSRTEL----------QLLNQLHCRRKRRH 151

  Fly    71 RTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSL 135
            ||.||..||:.||.||.:|:|||:..||::|.:::|.|.:|:|||||||||.|:|
 Frog   152 RTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRRQ---------- 206

  Fly   136 SSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQ 191
                                      ..:.|..:.|||.  .|.|:|:|.::|:.|
 Frog   207 --------------------------KRSSSEESENTQK--WNKSSKNSTEKGDEQ 234

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	31/54 (57%)
gsc	NP_001016704.1	Homeodomain	149..205	CDD:459649	31/55 (56%)