Protein Alignment oc and Nobox

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001178942.1
• Gene: Nobox / 502759
• RGDID: 1563929
• Length: 524
• Species: Rattus norvegicus
• Alignment Length: 133
• Identity: 35/133 - (26%)
• Similarity: 61/133 - (45%)
• Gaps: 33/133 - (24%)

  Fly    37 PMPSLGPFGLPHGLEAVGFSQGMWGVNTRK--------------QRRERTTFTRAQLDVLEALFG 87
            |..|.||..:|:.|            |.|:              :::.||.:...||:.||.:|.
  Rat   103 PSMSAGPGQVPNPL------------NFRERDLKKEPLEATCQFRKKTRTLYRSDQLEELERIFQ 155

  Fly    88 KTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCR--QQLQQQQQSNSLSSSKNASGGGSGNSC 150
            :..|||...|.|:|..:.:...|:.|||:|||||.|  ::|.:::.:|..:..:     .:.:.|
  Rat   156 EDHYPDSDKRHEIAQMVGVTPQRIMVWFQNRRAKWRKVEKLNEKEDNNGPAPPR-----ANSSQC 215

  Fly   151 SSS 153
            .|:
  Rat   216 RSA 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	22/54 (41%)
Nobox	NP_001178942.1	Homeodomain	136..192	CDD:459649	22/55 (40%)