Protein Alignment oc and Abd-B

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 592
• Identity: 115/592 - (19%)
• Similarity: 170/592 - (28%)
• Gaps: 234/592 - (39%)

  Fly   125 QLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQS------------SGG 177
            |.|||||.:::.:|            |.||...:....:..::.:..|.:            :..
  Fly    57 QQQQQQQQHAVVAS------------SPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQ 109

  Fly   178 NNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAAS 242
            .....:.|:|...|..||          ......|....|.|::.||:               .:
  Fly   110 QQHLPAPQQQQQLQQQQQ----------QQQQQLATTPVAGALSPAQT---------------PT 149

  Fly   243 GGTNQSANNNSNNNNQ---GNSTPNSSSSGGGGG-SQAGGHLSAAAAAAALNVTAAHQNSSPLLP 303
            |.:.|...:.::.::|   ...||||.:||.... .|.....:||.|.....:.|         |
  Fly   150 GPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVA---------P 205

  Fly   304 TPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGV------------GVGVGVGVG 356
            |.| ||||.|:..:||                      .:|:.:            |.|......
  Fly   206 TTA-SVSPSSVSSQKE----------------------DINMSIQLAPLHIPAIRAGPGFETDTS 247

  Fly   357 VGVSQDLLRSPYDQLKDAGGDIGAGVHHHHSIYGSA--------AGSNPRLLQPGGNITPMDSSS 413
            ..|.:......|:.         .|.:.|   |||.        |...|....|.|...
  Fly   248 AAVKRHTAHWAYND---------EGFNQH---YGSGYYDRKHMFAYPYPETQFPVGQYW------ 294

  Fly   414 SITTPSPPITPMSPQSAAAAAHAAQSAQSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAP 478
                 .|...|....||||||.....|:....:||..:...::..||               :.|
  Fly   295 -----GPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSY---------------EPP 339

  Fly   479 SYYSQMEYFSNQNQVNYNMGHSGYTASNF-------GLS--------PSP---SFTGTVSAQ--- 522
            :|.|.             .|..||.:.|:       |||        |:|   .:||.||.:
  Fly   340 TYSSP-------------GGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKR 391

  Fly   523 ----AFSQNSLD-------YMSPQDKYANMVXNL---------LFQYCSGGSNNNSSAGASGSGS 567
                .|....|:       |:|.|.:: .:. ||         .||.....:..||...|:...:
  Fly   392 KPYSKFQTLELEKEFLFNAYVSKQKRW-ELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNN 455

  Fly   568 GSGSGSGSGSGSGCGSGSGSGSGSGSGSNSSPQLEQHHHQQHQHQLQQHQHHQNHHQNQHQN--H 630
            .:.|.|                                  .|.|.....|||..||.|...|  |
  Fly   456 NNNSSS----------------------------------NHNHAQATQQHHSGHHLNLSLNMGH 486

  Fly   631 HGHHHHQ 637
            |....||
  Fly   487 HAAKMHQ 493

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	9/56 (16%)