DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and ey

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:548 Identity:137/548 - (25%)
Similarity:216/548 - (39%) Gaps:172/548 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            ||.:|.||:||..|:|.||..|.:|.|||:|.||.:|.||.|||:|:||||.|||||.|::.:.:
  Fly   469 RKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLR 533

  Fly   130 QQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQ 194
            .|..:.:|:     |.|..|.|:|:..|.::|.|:.|:.::....|.|          |.|.|:.
  Fly   534 NQRRTPNST-----GASATSSSTSATASLTDSPNSLSACSSLLSGSAG----------GPSVSTI 583

  Fly   195 QGGGSSGGNNSNNNSAAAAASAAAAVAAAQS------IKTHHSS------------FLSAAAAAA 241
            .|..|....::|.|    |.:..|.:.:::|      |:...:|            .:.:.....
  Fly   584 NGLSSPSTLSTNVN----APTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCRRVCSPCPLG 644

  Fly   242 SGGTNQSANNNSNNNNQGNS-----TPN-SSSSGGGGGSQAGGHLSAAAAAAALNVTAA-----H 295
            .||...:.:..||.:.||::     :|. :.:||..|...:..|.:|.:.:.:......     |
  Fly   645 VGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDSYGAVTPIPSFNH 709

  Fly   296 QNSSPLLP----------TPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVG 350
            ....||.|          || :|:.|..:..:...::..:...|.|.||.              .
  Fly   710 SAVGPLAPPSPIPQQGDLTP-SSLYPCHMTLRPPPMAPAHHHIVPGDGGR--------------P 759

  Fly   351 VGVGVGVGVSQDLLRSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSI 415
            .|||:|.|.|.:|               ||          |.:||...:|            |:.
  Fly   760 AGVGLGSGQSANL---------------GA----------SCSGSGYEVL------------SAY 787

  Fly   416 TTPSPPITPMSPQSAAAAAHAAQSAQSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSY 480
            ..|.|   ||:..|||.::.:|.|:.||:.:..|:.|..|                     .||.
  Fly   788 ALPPP---PMASSSAADSSFSAASSASANVTPHHTIAQES---------------------CPSP 828

  Fly   481 YSQMEYFSNQNQVNYNMGHSGYTASNFGLSPSPSFTGTVSAQAFSQNSLDYMSPQ-DKYANMVXN 544
            .|                    :||:||::.|..|            |.|.:||. ..||:|..|
  Fly   829 CS--------------------SASHFGVAHSSGF------------SSDPISPAVSSYAHMSYN 861

  Fly   545 LLFQYCSGGSNNNSSAGASGSGSGSGSG 572
                |.| .:|..:.:.|||:.:....|
  Fly   862 ----YAS-SANTMTPSSASGTSAHVAPG 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 33/54 (61%)
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeodomain 473..528 CDD:459649 33/54 (61%)
Blue background indicates that the domain is not in the aligned region.

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