DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Ptx1

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster


Alignment Length:509 Identity:127/509 - (24%)
Similarity:186/509 - (36%) Gaps:151/509 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 HSYG-------GPHPHHSV--PHGPLPPGMPMPSL------GPFGLPH-GLEAVGFS-------- 56
            ||.|       ..||||:|  ||  .|...|:..|      |.|...| .:.||..|        
  Fly   144 HSAGQDLVGGYSQHPHHTVVPPH--TPKHEPLEKLRIWAETGDFRDSHSSMTAVANSLDSTHLNN 206

  Fly    57 -----------------QGMWGVN------------------------------TRKQRRERTTF 74
                             .|...||                              .::|||:||.|
  Fly   207 FQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHF 271

  Fly    75 TRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSK 139
            |..||..||..|.:.||||:..|||:|:..||.|:||:|||||||||.|     :::.|:::::.
  Fly   272 TSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWR-----KRERNAMNAAV 331

  Fly   140 NASG--GGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGG--GSS 200
            .|:.  .|.|.......|:....|            |...||..|.....|.........  ||.
  Fly   332 AAADFKSGFGTQFMQPFADDSLYS------------SYPYNNWTKVPSPLGTKPFPWPVNPLGSM 384

  Fly   201 GGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNS 265
            ...|.:.||.....:.|:.||    :..:::|.|       .|....|.:|.||....|...|.:
  Fly   385 VAGNHHQNSVNCFNTGASGVA----VSMNNASML-------PGSMGSSLSNTSNVGAVGAPCPYT 438

  Fly   266 SSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVG 330
                    :.|..::..:||...:        ||.:    ::|::.:.:.. |:|.|.|:||...
  Fly   439 --------TPANPYMYRSAAEPCM--------SSSM----SSSIATLRLKA-KQHASAGFGSPYS 482

  Fly   331 GGGGGGGASSGGLNLGVGVGVGVG--VGVGVSQDLLRSPYDQLKD-AGGDI-GAGVHH------- 384
            .......::|.||:.....||||.  |.......||......|:. :||.: |:||.:       
  Fly   483 APSPVSRSNSAGLSACQYTGVGVTDVVXENALGALLNQHQHHLQHFSGGSVGGSGVPNGMQQHSG 547

  Fly   385 ---HHSIYG------SAAGSNPRLLQPGGNITPMDSSSSITTPSPPITPMSPQS 429
               |||..|      ...|..|...|..||.: ::.|:.    ||...|::..|
  Fly   548 NMLHHSNLGLDHSDLGLVGGGPSNHQDEGNHS-LEGSNK----SPMEAPLANSS 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 31/51 (61%)
Ptx1NP_001138130.2 Homeobox 268..320 CDD:278475 31/51 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450938
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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