DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and btn

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster


Alignment Length:103 Identity:36/103 - (34%)
Similarity:55/103 - (53%) Gaps:17/103 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMR 97
            |.|..:||     ....|.|:.           ..|:|||.|::.||..|||.|..:.|.....|
  Fly    68 PTGQELPS-----QRSKLRAIS-----------SNRKERTAFSKTQLKQLEAEFCYSNYLTRLRR 116

  Fly    98 EEVALKINLPESRVQVWFKNRRAKCRQ-QLQQQQQSNS 134
            .|:|:.:.|.|.:|:|||:|||.||:: :|::||.|::
  Fly   117 YEIAVALELTERQVKVWFQNRRMKCKRIKLEEQQGSSA 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 25/54 (46%)
btnNP_732768.1 Homeodomain 87..143 CDD:459649 26/55 (47%)

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