Protein Alignment oc and Ubx

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 360
• Identity: 85/360 - (23%)
• Similarity: 118/360 - (32%)
• Gaps: 120/360 - (33%)

  Fly   200 SGGNNSNNNSAAAAASAAAAVAAAQS-IKTHH-------SSFLSAAAAA-------ASGGTNQ-- 247
            |||::....||||||.....::...| ...||       |.:.::..||       .:|...|
  Fly    25 SGGHHDQTASAAAAAYRGFPLSLGMSPYANHHLQRTTQDSPYDASITAACNKIYGDGAGAYKQDC 89

  Fly   248 ------SANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPA 306
                  :.|...:..|.|.|.......|||||..|||...|..|.......|..||:    |...
  Fly    90 LNIKADAVNGYKDIWNTGGSNGGGGGGGGGGGGGAGGTGGAGNANGGNAANANGQNN----PAGG 150

  Fly   307 TSVSPVSIVCKKEHLSGGY-----GSSVG--GGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDLL 364
            ..|.|.:  |..:...|||     ||.|.  ||..||..|..|.|...|   ||..||||:
  Fly   151 MPVRPSA--CTPDSRVGGYLDTSGGSPVSHRGGSAGGNVSVSGGNGNAG---GVQSGVGVA---- 206

  Fly   365 RSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPPITPMSPQS 429
                          |||                         |..:::.:|             |
  Fly   207 --------------GAG-------------------------TAWNANCTI-------------S 219

  Fly   430 AAAAAHAAQSAQSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSYYSQMEYFSNQNQVN 494
            .||       ||:|..|:.|.|   |||..|. |.....:.|.:              ..::::.
  Fly   220 GAA-------AQTAAASSLHQA---SNHTFYP-WMAIAGECPED--------------PTKSKIR 259

  Fly   495 YNMGHSGYTASNFGLSPSPSFTGTVSAQAFSQNSL 529
            .::...|..:::.|...|.|..|::.......|.|
  Fly   260 SDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGL 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649