Protein Alignment oc and ems

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 222
• Identity: 54/222 - (24%)
• Similarity: 80/222 - (36%)
• Gaps: 84/222 - (37%)

  Fly     1 MAAGFLKSGDLGPHPHSYGGPHPHHSVPHGPLP---PGMP-----------MPSLGPFGLPHGLE 51
            |..|...:|.:.|.|...|||         |:|   ||:|           .|.|.|...||.:.
  Fly   257 MMPGMPPAGLVRPFPMGPGGP---------PMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIA 312

  Fly    52 AVGF---------------------------------SQGM---------WGVNT---------- 64
            |..|                                 :.||         |.::.
  Fly   313 AAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFP 377

  Fly    65 --------RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 121
                    ||.:|.||.|:.:||..||..|...:|.....|:.:|..:||.|::|:|||:|||.|
  Fly   378 GSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTK 442

  Fly   122 CRQQLQQQQQSNSLSSSKNASGGGSGN 148
             .:::||:.:......|:.....|||:
  Fly   443 -HKRMQQEDEKGGEGGSQRNMHNGSGD 468

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	23/54 (43%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	23/56 (41%)