DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Poxm

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster


Alignment Length:334 Identity:89/334 - (26%)
Similarity:126/334 - (37%) Gaps:88/334 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KTRYPDIF--------MREEVALKINLPE-SRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASG 143
            |.|.|.||        :.|.:..|.|:|. |.:....:|:..    .|..|....::..|.::||
  Fly    96 KQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLG----SLGHQHTPGTVMGSGSSSG 156

  Fly   144 GGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNN 208
            ||        |.:|....||..|:|||...|:.||                .|||....::.:::
  Fly   157 GG--------SVSSNGGQNNGTSASNNINLSNLGN----------------PGGGPHHPHHHHHH 197

  Fly   209 SAAAAASAAAAVAAAQSIKTH-HSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGG 272
            .:||||::|..|.|......| ::|.....:|||:.......           .:|:.....||.
  Fly   198 QSAAAAASAHHVHAHAHAHAHLYNSIYQPYSAAAAYSMKTPC-----------GSPSPPQGAGGQ 251

  Fly   273 GSQAGGH--LSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGG 335
            ||....|  .|.||||||.:..::|..|..|....|.::          ..|...|..|||.||.
  Fly   252 GSVPHPHQLRSVAAAAAAAHWPSSHSVSDILAHHQAVAL----------RASCQVGVGVGGMGGM 306

  Fly   336 GGASSGGLNLGVGVGVGVGVGVGVSQDLL--------RSPYD-----QLKDAGGDIGAGVHHHHS 387
            |...| .|.:......|...|    |.||        :|||:     |        ..|:||||.
  Fly   307 GSTVS-PLPMTPSPVAGTAGG----QPLLDCEGGAGQQSPYNYYMYFQ--------NGGMHHHHH 358

  Fly   388 IYG-SAAGS 395
            ..| .|||:
  Fly   359 HGGMMAAGA 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 11/43 (26%)
PoxmNP_001036687.1 PAX 10..133 CDD:128645 10/36 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450890
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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