DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and prrx1a

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_999899.1 Gene:prrx1a / 406431 ZFINID:ZDB-GENE-020905-5 Length:245 Species:Danio rerio


Alignment Length:139 Identity:54/139 - (38%)
Similarity:72/139 - (51%) Gaps:30/139 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            |||||.||||..:||..||.:|.:|.|||.|:||::|.::||.|:||||||:|||||.|:..:..
Zfish    94 RKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAM 158

  Fly   130 QQSNSLSSSKNASG----------------------GGSGNSCSSSSANSRSNSNNNGSSSNNNT 172
            ..|.:.|..|:.||                      .||..|.|:.:..|        .|..|||
Zfish   159 LASKNASLLKSFSGEVTAVEQPIVPRPAPRPNDYLSWGSSPSYSAMATYS--------PSCANNT 215

  Fly   173 QSSGGNNSN 181
            .:.|.|.:|
Zfish   216 TAQGMNMAN 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 33/54 (61%)
prrx1aNP_999899.1 Homeodomain 101..153 CDD:459649 30/51 (59%)
OAR 220..237 CDD:461067 2/5 (40%)

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