DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment oc and mix1

DIOPT Version :9

Sequence 1:	NP_001356934.1	Gene:	oc / 31802	FlyBaseID:	FBgn0004102	Length:	664	Species:	Drosophila melanogaster
Sequence 2:	NP_988848.1	Gene:	mix1 / 394439	XenbaseID:	XB-GENE-485898	Length:	357	Species:	Xenopus tropicalis

Alignment Length:	170	Identity:	55/170 - (32%)
Similarity:	78/170 - (45%)	Gaps:	45/170 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 PHGPLPPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYP 92
            |..|:|....:|:                         .|||:||.||:||||:||..|....||
Frog    73 PRNPVPDASLLPA-------------------------SQRRKRTFFTQAQLDILEQFFQTNMYP 112

  Fly    93 DIFMREEVALKINLPESRVQVWFKNRRAKCRQQ--------LQQQQQSNSLSSSKNA-SGGGSGN 148
            ||..|||:|..|.:||||:||||:|||||.|:|        |.....|::..::::. ....:.|
Frog   113 DIHHREELARHIYIPESRIQVWFQNRRAKVRRQGAKATKPVLAGHHYSSTFGATRSMFPSAPAPN 177

  Fly   149 SCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQG 188
            |.|...|.:|:.:           |....:.:||..|.||
Frog   178 SSSHPMATARAQA-----------QPMKDSQANKFHQSQG 206

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeobox	71..123	CDD:333795	33/51 (65%)
mix1	NP_988848.1	Homeobox	90..143	CDD:278475	33/52 (63%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000