DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and eyg

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:446 Identity:107/446 - (23%)
Similarity:151/446 - (33%) Gaps:146/446 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAGFLKSGDLG---PHPHSYGG--PHPHHSVPHG-----PLPP--------------------G 35
            :|..|.::...|   |.||.||.  .||..:||.|     |.||                    .
  Fly   224 VATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANLPPSAASA 288

  Fly    36 MPMPSLGPFGLPHGLEAVG---------FSQGMWGVNT--------------------RKQRRER 71
            :|:.:.|.....| |.|.|         .|.|....:|                    .|.||.|
  Fly   289 VPVSTCGSLSSAH-LMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEPKFRRNR 352

  Fly    72 TTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLS 136
            |||:..||:.||..|.|:.||.:..||.::.:.:|.|:||||||.|||||.|:..:........|
  Fly   353 TTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRRHQRMNLLKRQRS 417

  Fly   137 SSKNASGGGSGNSCSSSSANSRSNSNNNGSS---------------------------------- 167
            |..|.......|...:||....::|:.:.|:                                  
  Fly   418 SPANPLHSQQSNDAPASSPTPSNHSSASTSAPVAPVPPPQQPLPLCGDHSPQGPPPSVLLHPLHG 482

  Fly   168 -----------------------SNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSS--------- 200
                                   |:.:.|...........|:|.:.|..||...|.         
  Fly   483 PPGGHHHHHPLHLPTHPAALQLLSHYHQQQQQQQQQQHQQQQQQHHQQQQQLSPSGCNPAANHLS 547

  Fly   201 -GGNNSNNNSAAAAASAAA--------AVAAAQSIKTHHSSFLS-AAAAAASGGTNQSANNNSNN 255
             ||..|...|..::.||||        ||||:.::.....|.|. :|....|||.....|.|:..
  Fly   548 MGGERSAFRSLVSSPSAAAFLGLARQYAVAASLTVAEEQRSRLHYSAGGLGSGGEGTGPNTNTTQ 612

  Fly   256 NNQGNSTPNSSSSGG----GGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPAT 307
            :.....|.::|||..    .....:.|.:.::||.||   ..|..:||   ..|||
  Fly   613 SGGSTMTVDNSSSDSDEEINVHDDSDGEIESSAATAA---KVARLSSS---DAPAT 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 29/54 (54%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197
Homeodomain 349..405 CDD:459649 29/55 (53%)
Blue background indicates that the domain is not in the aligned region.

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