DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and toe

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster


Alignment Length:405 Identity:106/405 - (26%)
Similarity:138/405 - (34%) Gaps:166/405 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAGFLKSGDLG--PHP-HSYGGPHPHHSVP----HGPLPPGMPM---PSLGPFGLPHGLEAVGF- 55
            ||.|.::...|  .|| |    |||:.|.|    |.||...:|:   |..||.|....|:..|. 
  Fly   238 AAEFARAASYGYAIHPTH----PHPYTSFPTWPAHHPLWGAVPLATPPGGGPAGAGGALQPGGSG 298

  Fly    56 ----SQGMW---------------GVNTR------------------------------------ 65
                |.|..               |.||.                                    
  Fly   299 SSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALSPDSGSRDSRSPDADA 363

  Fly    66 -------------------KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRV 111
                               |.||.||||:..|||.||..|.|:.||.:..||::|.:..|.|:||
  Fly   364 NRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARV 428

  Fly   112 QVWFKNRRAKCRQ----QLQQQQQSNSLSSS-----------------------------KNASG 143
            ||||.|||||.|:    .|.:|:.|.|.|||                             |....
  Fly   429 QVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPTPLVNPVVSPVSPIPVPVPVAVPESGQQKQPYP 493

  Fly   144 GGSGNSCSSSSANSRSNSNNNGSSSNN---NTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNS 205
            ..:.|.|::||           ||||:   ||.:.|...|:|:|              |...|..
  Fly   494 YSTSNMCNTSS-----------SSSNSQPCNTINPGSKMSSKTS--------------SVSSNQH 533

  Fly   206 NNNSAAAAASAAAAVAAAQSIKTHHSSF---------------LSAAAAAASGGTNQSANNNSNN 255
            ....|||.|:|:...:|..|:...:|:|               .||||.|.|......|......
  Fly   534 MEEPAAAVATASPTASAPLSMGGENSAFRALPMTLPMPMTLPTASAAAFALSFARQYIAKYMGTP 598

  Fly   256 NNQGN-STPNSSSSG 269
            .|.|: |:|..:.||
  Fly   599 LNLGHGSSPIQAQSG 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 31/54 (57%)
toeNP_524041.2 HTH_ARSR 134..230 CDD:481197
Homeodomain 385..441 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

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