Protein Alignment oc and shox2

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_957490.1
• Gene: shox2 / 394171
• ZFINID: ZDB-GENE-040426-1457
• Length: 299
• Species: Danio rerio
• Alignment Length: 199
• Identity: 67/199 - (33%)
• Similarity: 97/199 - (48%)
• Gaps: 37/199 - (18%)

  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQ 130
            ||||.||.||..||:.||.||.:|.|||.|||||::.::.|.|:||||||:|||||||:|..|..
Zfish   107 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLH 171

  Fly   131 QSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQ 195
            :...:.::            |...|...:...|.|:......|.|..|....|.|.|  :|....
Zfish   172 KGVLIGAA------------SQFEACRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQ--AQLQLD 222

  Fly   196 GGGSSGGNNSNNNSAAAA--------------ASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTN 246
            ...:...::.:::.||.|              |:.||..|:|.|:         .|||||:..||
Zfish   223 SAVAHAHHHLHSHLAAHAPYMMFPAPPFGLPLATLAAESASAASV---------VAAAAAAKTTN 278

  Fly   247 QSAN 250
            ::::
Zfish   279 KNSS 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	34/54 (63%)
shox2	NP_957490.1	Homeodomain	109..165	CDD:459649	35/55 (64%)
		OAR	278..295	CDD:461067	1/5 (20%)