DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and PHDP

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:110 Identity:48/110 - (43%)
Similarity:69/110 - (62%) Gaps:6/110 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKI 104
            ::|.:.....|::.| ..|:...:..||||.|||||..||:.||.:|.:|.||||:.|||:|.|:
  Fly    86 NIGSYNTDFHLKSYG-DDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKL 149

  Fly   105 NLPESRVQVWFKNRRAKCRQQLQ-----QQQQSNSLSSSKNASGG 144
            :|.|:||||||:|||||.|:|.:     .:.:|:.|...||...|
  Fly   150 HLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKNPVAG 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 35/54 (65%)
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 35/55 (64%)

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