DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and otp

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:508 Identity:112/508 - (22%)
Similarity:159/508 - (31%) Gaps:215/508 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQL 126
            ::..||:|.||.||.|||:.||..|.||.|||||||||:|::|.|.||||||||:|||||.::  
  Fly   111 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK-- 173

  Fly   127 QQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSG----GNNSNKSSQKQ 187
                                           |..:.|...:......|.|    |.|....:...
  Fly   174 -------------------------------RKKTTNVFRTPGALLPSHGLPPFGANITNIAMGD 207

  Fly   188 GNSQSSQQGGG--SSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSAN 250
            |...:...||.  |.|.|                                 ...|..|..||   
  Fly   208 GLCGTGMFGGDRWSVGVN---------------------------------PMTAGFGQLNQ--- 236

  Fly   251 NNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIV 315
                      |:|.|||...|                 ||                         
  Fly   237 ----------SSPLSSSLNSG-----------------LN------------------------- 249

  Fly   316 CKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDLLRSPYDQLKDAGGDIGA 380
                                     .|:|:|..:|.|.....|::.                :|.
  Fly   250 -------------------------SGINMGSALGAGSYQHYGLNA----------------LGD 273

  Fly   381 GVHHHHSIYGSAAGSNPRLLQPGGN---ITP--MDSSSSITTPSPPITPMSPQSAAAAAHAAQSA 440
            .:.:.||:.|.:.|       |.|:   .||  |:|.||:|.|     |:|.|     .:::|:.
  Fly   274 SMMYQHSVGGVSCG-------PSGSPSATTPPNMNSCSSVTPP-----PLSAQ-----PNSSQNE 321

  Fly   441 QSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSYYSQMEYFSNQNQVNYNMGHSGYTAS 505
            .:......|.......|      .:|.||...::..||...:|     .|.|:..:|        
  Fly   322 LNGEPMPLHQQQQQQTH------QHQQQQTHQHHPMAPPTPTQ-----QQQQLPQSM-------- 367

  Fly   506 NFGLSPSPSFTGTVSAQAFSQNSLDYMSPQDKYANMVXNLLFQYCSGGSNNNS 558
               .|||.....|:.:.|..:.....::....|..|. :....|   .||:||
  Fly   368 ---QSPSDGANDTLHSIAALRRRASELNAIPSYLQMAPHNYEHY---NSNSNS 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 38/54 (70%)
otpNP_001286654.1 Homeodomain 117..168 CDD:459649 34/50 (68%)

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