DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oc and otp

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:508 Identity:112/508 - (22%)
Similarity:159/508 - (31%) Gaps:215/508 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQL 126
            ::..||:|.||.||.|||:.||..|.||.|||||||||:|::|.|.||||||||:|||||.::  
  Fly   111 LDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKK-- 173

  Fly   127 QQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSG----GNNSNKSSQKQ 187
                                           |..:.|...:......|.|    |.|....:...
  Fly   174 -------------------------------RKKTTNVFRTPGALLPSHGLPPFGANITNIAMGD 207

  Fly   188 GNSQSSQQGGG--SSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSAN 250
            |...:...||.  |.|.|                                 ...|..|..||   
  Fly   208 GLCGTGMFGGDRWSVGVN---------------------------------PMTAGFGQLNQ--- 236

  Fly   251 NNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIV 315
                      |:|.|||...|                 ||                         
  Fly   237 ----------SSPLSSSLNSG-----------------LN------------------------- 249

  Fly   316 CKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDLLRSPYDQLKDAGGDIGA 380
                                     .|:|:|..:|.|.....|::.                :|.
  Fly   250 -------------------------SGINMGSALGAGSYQHYGLNA----------------LGD 273

  Fly   381 GVHHHHSIYGSAAGSNPRLLQPGGN---ITP--MDSSSSITTPSPPITPMSPQSAAAAAHAAQSA 440
            .:.:.||:.|.:.|       |.|:   .||  |:|.||:|.|     |:|.|     .:::|:.
  Fly   274 SMMYQHSVGGVSCG-------PSGSPSATTPPNMNSCSSVTPP-----PLSAQ-----PNSSQNE 321

  Fly   441 QSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSYYSQMEYFSNQNQVNYNMGHSGYTAS 505
            .:......|.......|      .:|.||...::..||...:|     .|.|:..:|        
  Fly   322 LNGEPMPLHQQQQQQTH------QHQQQQTHQHHPMAPPTPTQ-----QQQQLPQSM-------- 367

  Fly   506 NFGLSPSPSFTGTVSAQAFSQNSLDYMSPQDKYANMVXNLLFQYCSGGSNNNS 558
               .|||.....|:.:.|..:.....::....|..|. :....|   .||:||
  Fly   368 ---QSPSDGANDTLHSIAALRRRASELNAIPSYLQMAPHNYEHY---NSNSNS 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 37/51 (73%)
otpNP_001286654.1 Homeobox 119..167 CDD:278475 32/47 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450952
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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