DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Poxn

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:393 Identity:81/393 - (20%)
Similarity:117/393 - (29%) Gaps:154/393 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSN---- 162
            :::....|.:..|      :.|:|||||:                  .|..||..|.|:.|    
  Fly    90 IRLKEENSGMFAW------EIREQLQQQR------------------VCDPSSVPSISSINRILR 130

  Fly   163 NNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAV------- 220
            |:|..::..|                   ||||            |:|||||:||||.       
  Fly   131 NSGLWTDEMT-------------------SSQQ------------NAAAAAAAAAAAAHQAGSGP 164

  Fly   221 --------------------AAAQSIKTH------------HSSFLSAAAAAASGGTNQSANNNS 253
                                ||..||..:            ......|.....|.|...|...|.
  Fly   165 SNGYGGQAPPPPVTVAPPTPAATPSIARYAKPPALMMNSAGEMPIKPAPKMPPSMGHGHSHGLNP 229

  Fly   254 NNN----------------------NQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAA-- 294
            |.:                      .|.:....:::|||.....|||:|..|.||||.:.|:|  
  Fly   230 NVSGLDLSYSALHKHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALG 294

  Fly   295 ---HQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVG 356
               ...||..|.||..:...:|.....:........:..|||.|.|::.           ....|
  Fly   295 GFTKSESSIDLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAP-----------EASPG 348

  Fly   357 VGVSQDLLRSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPP 421
            ..:|....|:||                  ||.........||......:..::|||..::...|
  Fly   349 STLSHSRKRNPY------------------SIEELLKKPEKRLRLDSNRLECLESSSCESSQDSP 395

  Fly   422 ITP 424
            :.|
  Fly   396 VAP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 2/20 (10%)
PoxnNP_001261016.1 HTH 5..133 CDD:304362 15/66 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451037
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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