DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and prrx1b

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_017207930.1 Gene:prrx1b / 337089 ZFINID:ZDB-GENE-030131-9033 Length:267 Species:Danio rerio


Alignment Length:78 Identity:42/78 - (53%)
Similarity:56/78 - (71%) Gaps:6/78 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            |||||.||||..:||..||.:|.:|.|||.|:||::|.::||.|:||||||:|||||.|      
Zfish    94 RKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR------ 152

  Fly   130 QQSNSLSSSKNAS 142
            :...::.:|||||
Zfish   153 RNERAMLASKNAS 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 33/54 (61%)
prrx1bXP_017207930.1 Homeodomain 101..153 CDD:459649 31/57 (54%)
OAR 242..259 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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