Protein Alignment oc and Gsc

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 166
• Identity: 70/166 - (42%)
• Similarity: 93/166 - (56%)
• Gaps: 26/166 - (15%)

  Fly     2 AAGFLKSGDLGPHPHSYGGPHPHHSVPH-GPLPPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTR 65
            |||.  ||. |.|||...| ||||  || |....|.           |.|..:|.     |...:
  Fly   296 AAGL--SGH-GHHPHHPHG-HPHH--PHLGAHHHGQ-----------HHLSHLGH-----GPPPK 338

  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQ 130
            ::||.||.||..||:.|||.|.||.|||:.:||::|||::|.|.||:|||||||||.|:|.:::|
  Fly   339 RKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQ 403

  Fly   131 QSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGS 166
            :  .|...:....|.:.|..::||:.:.| |..|||
  Fly   404 E--RLRKLQEEQCGSTTNGTTNSSSGTTS-STGNGS 436

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	35/54 (65%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	35/55 (64%)