Protein Alignment oc and Gsc

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001178802.1
• Gene: Gsc / 317715
• RGDID: 631425
• Length: 256
• Species: Rattus norvegicus
• Alignment Length: 160
• Identity: 57/160 - (35%)
• Similarity: 83/160 - (51%)
• Gaps: 20/160 - (12%)

  Fly    13 PHPHSYGGPHPHHSVPHGPLPPGM-PMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTR 76
            |.|..|.||   .||...|:|..| |..::|......       .|.:..::.|::||.||.||.
  Rat   115 PTPPGYEGP---GSVLVSPVPHQMLPYMNVGTLSRTE-------LQLLNQLHCRRKRRHRTIFTD 169

  Fly    77 AQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNA 141
            .||:.||.||.:|:|||:..||::|.|::|.|.:|:|||||||||.|:|.:        |||:.:
  Rat   170 EQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKR--------SSSEES 226

  Fly   142 SGGGSGNSCSS-SSANSRSNSNNNGSSSNN 170
            ......|..|| :|...|.....:...|::
  Rat   227 ENAEKWNKTSSKASPEKREEEGKSDLDSDS 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	32/54 (59%)
Gsc	NP_001178802.1	Homeodomain	161..217	CDD:459649	32/55 (58%)