DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and arxa

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_571459.1 Gene:arxa / 30657 ZFINID:ZDB-GENE-990415-15 Length:453 Species:Danio rerio


Alignment Length:410 Identity:92/410 - (22%)
Similarity:130/410 - (31%) Gaps:184/410 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GLEAVGFSQGM---WGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESR 110
            |.::|..|.|.   .|:..|||||.|||||..||:.||..|.||.|||:|.|||:|::::|.|:|
Zfish   194 GEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEAR 258

  Fly   111 VQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSS 175
            |||||:|||||.|::                                                  
Zfish   259 VQVWFQNRRAKWRKR-------------------------------------------------- 273

  Fly   176 GGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAA 240
                     :|.| .|:...|....|        ..|||...:..........|....|.:|..|
Zfish   274 ---------EKAG-VQAHPTGLPFPG--------PLAAAHPLSHYLEGGPFPPHPHPALESAWTA 320

  Fly   241 ASGGTNQSANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLP-T 304
                                                     |||||||....|...|||.|.| |
Zfish   321 -----------------------------------------AAAAAAAFPGLAPPPNSSALPPAT 344

  Fly   305 PATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDLLRSPYD 369
            |                                       ||:|.                    
Zfish   345 P---------------------------------------LGLGT-------------------- 350

  Fly   370 QLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSS-ITTPSPPI-TPMSPQSAAA 432
                   .:|..:..|.:..|...|   ||....|.:|...:::: :...:||: :|:.|.:|..
Zfish   351 -------FLGTAMFRHPAFIGPTFG---RLFSSMGPLTSASTAAALLRQTAPPVESPVQPSAALP 405

  Fly   433 AAHAAQSAQSAHHSAAHSAA 452
            ...::.|:.:|...|:..||
Zfish   406 EPPSSSSSTAADRRASSIAA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 35/54 (65%)
arxaNP_571459.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..75
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..149
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..212 5/17 (29%)
Homeodomain 216..272 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..418 7/27 (26%)
OAR 417..435 CDD:461067 3/9 (33%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 421..434 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

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