DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and otx1

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_571325.2 Gene:otx1 / 30500 ZFINID:ZDB-GENE-980526-400 Length:323 Species:Danio rerio


Alignment Length:437 Identity:129/437 - (29%)
Similarity:164/437 - (37%) Gaps:168/437 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PGMPMPSLGPFGLPHGL--EAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFM 96
            |...|..||..|....|  .:||:.     ...||||||||||||:|||:|||||.|||||||||
Zfish     8 PPYAMNGLGLSGAAMDLLHPSVGYP-----ATPRKQRRERTTFTRSQLDILEALFAKTRYPDIFM 67

  Fly    97 REEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNS 161
            |||||||||||||||||||||||||||||.|                  ||:|..:..|..:|:.
Zfish    68 REEVALKINLPESRVQVWFKNRRAKCRQQQQ------------------SGSSTKTRPAKKKSSP 114

  Fly   162 NNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSI 226
            ....:.|    :|||          |....:....|.||..::|.||:...:.|.:.:..     
Zfish   115 TRESTGS----ESSG----------QFTPPAVSSAGSSSSSSSSTNNTGICSTSTSISTV----- 160

  Fly   227 KTHHSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNV 291
                ||..|.|.                  :.|::.|:.|                         
Zfish   161 ----SSIWSPAI------------------SPGSAPPSVS------------------------- 178

  Fly   292 TAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSS-------VGGGGGGGGASSGGLNLGVGV 349
                      ||.|   |:|.:..|.:..:||...|:       ..|...|....||....||  
Zfish   179 ----------LPEP---VAPSNTSCMQRSVSGTASSTYPMPYNQTTGYSQGYPTPSGSYFSGV-- 228

  Fly   350 GVGVGVGVGVSQDLLRSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSS 414
                                   |.|..: |.:|.||         :|.      .::||.:||.
Zfish   229 -----------------------DCGSYL-APMHSHH---------HPH------QLSPMTASSM 254

  Fly   415 ITTPSPPITPMSPQSAAAAAHAAQSAQSAHHSAAHSAAYMSNHDSYN 461
            .|.|.              .|.:||  |.||...|..||.....::|
Zfish   255 PTHPH--------------HHISQS--SGHHHHHHHQAYSGTGLAFN 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 51/54 (94%)
otx1NP_571325.2 Homeodomain 39..95 CDD:459649 52/55 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..155 23/95 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..204 12/91 (13%)
TF_Otx 172..258 CDD:427350 29/164 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..277 16/68 (24%)

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