DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and GSC2

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_005306.1 Gene:GSC2 / 2928 HGNCID:4613 Length:205 Species:Homo sapiens


Alignment Length:151 Identity:55/151 - (36%)
Similarity:71/151 - (47%) Gaps:36/151 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GPHPHHSVPHGP----------------LPPGMPM----PSLGPFGLPHGLEAVGFSQGMWGVNT 64
            ||   .:.|.||                |.|.:|:    |:.|...||   .|||..      :.
Human    71 GP---RAAPCGPPEAAAGLGARLAWPLRLGPAVPLSLGAPAGGSGALP---GAVGPG------SQ 123

  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            |:.||.||.|:..||..|||||.:.:|||:..||.:|.:|.|.|.||:|||||||||.|.|.:..
Human   124 RRTRRHRTIFSEEQLQALEALFVQNQYPDVSTRERLAGRIRLREERVEVWFKNRRAKWRHQKRAS 188

  Fly   130 QQSNSLSSSKNASGGGSGNSC 150
            ..:..|...|.:..|    ||
Human   189 ASARLLPGVKKSPKG----SC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 32/54 (59%)
GSC2NP_005306.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..58
Homeodomain 127..183 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..205 3/23 (13%)
Blue background indicates that the domain is not in the aligned region.

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