Protein Alignment oc and ind

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 187
• Identity: 47/187 - (25%)
• Similarity: 70/187 - (37%)
• Gaps: 46/187 - (24%)

  Fly     4 GFLKSGDLGPHPHSYGGPHPHHSVPHGPLPPGMPMPSLGPFGL---------------------- 46
            |...|..|..:|:|...| |.|::...|:..|:|:|..|.|..
  Fly   127 GCYPSPPLSANPNSQQLP-PIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNFDEPQGK 190

  Fly    47 ---------PHGLEAVGFSQG-------MWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIF 95
                     |:.......|.|       :........:|.||.||..||..||..|....|....
  Fly   191 RFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRL 255

  Fly    96 MREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSS 152
            .|.|:|.::.|.|.:|::||:|||.|       |::..|.|.:.|.|...:|:..:|
  Fly   256 RRIEIANRLRLSEKQVKIWFQNRRVK-------QKKGGSESPTFNLSTNSNGSPQAS 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	23/54 (43%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	24/62 (39%)