DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and VAX2

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_036608.1 Gene:VAX2 / 25806 HGNCID:12661 Length:290 Species:Homo sapiens


Alignment Length:177 Identity:53/177 - (29%)
Similarity:74/177 - (41%) Gaps:45/177 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AGFLKSGDLGPHPHSYGG---PHPHHSVPHGPLPPGMPMP----------------SLGPFGLPH 48
            ||.|::...|..|....|   ..|..|...|....|.|.|                ::....||.
Human    31 AGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEADHCRRILVRDAKGTIREIVLPK 95

  Fly    49 GLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQV 113
            ||:            ..:.:|.||:||..||..||..|.:.:|.....|.|:|.::||.|::|:|
Human    96 GLD------------LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKV 148

  Fly   114 WFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSN 160
            ||:|||.|     |::.||..|  .|.||.       |:|.|.:.||
Human   149 WFQNRRTK-----QKKDQSRDL--EKRASS-------SASEAFATSN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 24/51 (47%)
VAX2NP_036608.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 12/43 (28%)
Homeobox 105..158 CDD:306543 24/57 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..240
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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