DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Gsc2

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_083745.2 Gene:Gsc2 / 195333 MGIID:892006 Length:201 Species:Mus musculus


Alignment Length:160 Identity:58/160 - (36%)
Similarity:74/160 - (46%) Gaps:38/160 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PHSYGGPHPHH-SVPHGPLPP----------------GMPMPSLGPFGL------------PHGL 50
            |...||.:|.. ..|..|:|.                |.|..|.|| ||            |..|
Mouse    38 PQPVGGRNPAELDEPEAPVPAAPCACCCCCNPRAATRGTPETSSGP-GLRLAWPLRLAPATPSPL 101

  Fly    51 EA--VGFSQGMWGVN----TRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPES 109
            .|  .| |..:.|.:    .|:.||.||.|:..||..|||||.:.:|||:..||.:|::|.|.|.
Mouse   102 TAPRAG-SPALTGTSGPGPQRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAVRIRLREE 165

  Fly   110 RVQVWFKNRRAKCRQQLQQQQQSNSLSSSK 139
            ||:|||||||||.|.| ::...|..|..:|
Mouse   166 RVEVWFKNRRAKWRHQ-KRASSSRLLPGTK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 32/54 (59%)
Gsc2NP_083745.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..124 7/29 (24%)
Homeodomain 124..180 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..201 5/17 (29%)

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