Protein Alignment oc and unc-42

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001263845.1
• Gene: unc-42 / 192081
• WormBaseID: WBGene00006778
• Length: 279
• Species: Caenorhabditis elegans
• Alignment Length: 285
• Identity: 79/285 - (27%)
• Similarity: 112/285 - (39%)
• Gaps: 51/285 - (17%)

  Fly     7 KSGDLGPHPHSYGGPHPHH-SVPHGPLPPGMPMPSLGPFG--LPHGLEAVGFSQGMWGV-NT--- 64
            |..|||...|.:...:|.. ......|.|.....|.|.|.  ...||....|...:.|| ||
 Worm    21 KVKDLGVSLHDFTAYYPSSLDTVSASLRPISDPSSDGAFKKIKTEGLGGSVFGSSIAGVTNTPAR 85

  Fly    65 ------------RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKN 117
                        ..:||.|||||:.||..|:|.|.|:.||||::|||:|....|.|:|:||||:|
 Worm    86 LCSLERPESERLNSRRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQN 150

  Fly   118 RRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNK 182
            ||||.|:..:|      |:.:.|..     :|..|:.||:........::.|.:
 Worm   151 RRAKHRKHEKQ------LNKAINPP-----HSFLSNPANTLMRQGMYPAALNRD----------- 193

  Fly   183 SSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAA-----AQSIKTHHSSFLSAAAAAAS 242
            ....|...:.......|...:||..|..|....:..:..|     .:|:....::..|||.||.|
 Worm   194 GFWYQSYQRPMPYPTASPSYSNSFTNPIANFGHSITSFQADDEFYQKSLALRMTTTPSAATAATS 258

  Fly   243 GGTNQSANNNSNNNNQGNSTPNSSS 267
                 .||.|........::.|..|
 Worm   259 -----LANINYQQTQPSEASTNPPS 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	33/54 (61%)
unc-42	NP_001263845.1	Homeodomain	101..157	CDD:459649	33/55 (60%)