DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and ceh-8

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_492246.2 Gene:ceh-8 / 191617 WormBaseID:WBGene00000433 Length:276 Species:Caenorhabditis elegans


Alignment Length:165 Identity:62/165 - (37%)
Similarity:84/165 - (50%) Gaps:37/165 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            :||||.|||||..||..|||.|.||.|||::.||.:|.|:.|||.||||||:|||||.|:|.:|.
 Worm    58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQEKQD 122

  Fly   130 QQSNSLSSSKNASGGGSGNSCSSSS-------ANSRSNSNNNGSS-------------------- 167
            .|.....|.|:.....|..|.:.:.       ||:.|:::|||.|                    
 Worm   123 CQGEEKHSLKDTMPSWSWMSENKTDTPPMLPPANTLSSTHNNGISDEFFKTSEGKEVYGFPFAEY 187

  Fly   168 ---SNNNTQSSGGN-------NSNKSSQKQGNSQS 192
               ::|...|..||       :|:|.|.|:.:.|:
 Worm   188 GTPADNTHVSKTGNVFHLNFEDSDKKSMKKESPQT 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 36/54 (67%)
ceh-8NP_492246.2 Homeodomain 61..117 CDD:459649 36/55 (65%)

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