DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Otx1

DIOPT Version :9

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_035153.1 Gene:Otx1 / 18423 MGIID:97450 Length:355 Species:Mus musculus


Alignment Length:626 Identity:152/626 - (24%)
Similarity:195/626 - (31%) Gaps:344/626 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PFGLPHGLEAVGFSQGM------WGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVA 101
            |:|: :||...|.:..:      :....||||||||||||:|||||||||.||||||||||||||
Mouse     9 PYGM-NGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVA 72

  Fly   102 LKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGS 166
            ||||||||||||||||||||||||.|                  |||...:.....:|:...   
Mouse    73 LKINLPESRVQVWFKNRRAKCRQQQQ------------------SGNGTKTRPVKKKSSPVR--- 116

  Fly   167 SSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHS 231
                  :|||             |:||.|....:..::::::|:|::|||..|            
Mouse   117 ------ESSG-------------SESSGQFTPPAVSSSASSSSSASSASANPA------------ 150

  Fly   232 SFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQ 296
                |||||..||                                    :..|||::|:.     
Mouse   151 ----AAAAAGLGG------------------------------------NPVAAASSLST----- 170

  Fly   297 NSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQ 361
                  ||.::..||.||                                               
Mouse   171 ------PTASSIWSPASI----------------------------------------------- 182

  Fly   362 DLLRSPYDQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPPITPMS 426
                ||                          ||.|               :|::.|.|      
Mouse   183 ----SP--------------------------GSAP---------------TSVSVPEP------ 196

  Fly   427 PQSAAAAAHAAQSAQSAHHSAAHSAAYMSNHDSYNFWHNQYQQYPNNYAQAPSYYSQMEYFSNQN 491
               .||.::|:...:|....||.:||                .||.:|.|..||           
Mouse   197 ---LAAPSNASCMQRSVAAGAATAAA----------------SYPMSYGQGGSY----------- 231

  Fly   492 QVNYNMGHSGYTASNFGLSPSPSFTGTVSAQAFSQNSLDYMSPQDKYANMVXNLLFQYCSGGSNN 556
                   ..||.|      ||.|:.|.|...:       |::|                      
Mouse   232 -------GQGYPA------PSSSYFGGVDCSS-------YLAP---------------------- 254

  Fly   557 NSSAGASGSGSGSGSGSGSGSGSGCGSGSGSGSGSGSGSNSSPQLEQHHHQQHQHQLQQ------ 615
                                                        :..||   |.|||..      
Mouse   255 --------------------------------------------MHSHH---HPHQLSPMAPSSM 272

  Fly   616 --HQHHQNHHQNQHQNHHGHHHHQQQHHHDDEQRQDIGHQG 654
              |.||..|..:......|||||...|||         |||
Mouse   273 AGHHHHHPHAHHPLSQSSGHHHHHHHHHH---------HQG 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeobox 71..123 CDD:333795 49/51 (96%)
Otx1NP_035153.1 Homeobox 42..95 CDD:395001 50/52 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..144 20/92 (22%)
TF_Otx 180..274 CDD:397546 40/310 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..306 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2251
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 1 1.000 - - otm43101
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45793
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3028
SonicParanoid 1 1.000 - - X850
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.990

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