DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and ceh-37

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001360629.1 Gene:ceh-37 / 181530 WormBaseID:WBGene00000458 Length:292 Species:Caenorhabditis elegans


Alignment Length:230 Identity:72/230 - (31%)
Similarity:108/230 - (46%) Gaps:48/230 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMRE 98
            |..||....  |.|:....:          .||.||||||::|.||::||.||.:|:|||:|.||
 Worm    34 PVQPMTMFS--GAPYNAAMI----------PRKNRRERTTYSRQQLEILETLFNETQYPDVFARE 86

  Fly    99 EVALKINLPESRVQVWFKNRRAKCR-QQLQQQQQSNSLSSSKNA--------------SGGGSG- 147
            .||.:|.|.|||:||||||||||.| |:.|:.::||..|....:              .||..| 
 Worm    87 RVADQIRLQESRIQVWFKNRRAKYRLQEKQKPKRSNEKSQEHKSEDQQQTDVLDGEPLKGGSPGY 151

  Fly   148 --------NSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSSGGNN 204
                    .||..:.|:.:..:..:.|.......::..|.|  :::.|.|......|.|.   |.
 Worm   152 QPQIKSELESCDGAVASGKLGTPKSISPVETTASTTSSNTS--AAELQWNGDHKILGFGK---NE 211

  Fly   205 SNNNSA-------AAAASAAAAVAAAQSIKTHHSS 232
            :..::|       |:..|:::::.|..|:.|..||
 Worm   212 TTTSAAVSPTADNASTPSSSSSITATSSLPTTSSS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 37/54 (69%)
ceh-37NP_001360629.1 Homeodomain 56..111 CDD:459649 37/54 (69%)

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