DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and LOC1273474

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_061506563.1 Gene:LOC1273474 / 1273474 VectorBaseID:AGAMI1_003345 Length:364 Species:Anopheles gambiae


Alignment Length:293 Identity:86/293 - (29%)
Similarity:122/293 - (41%) Gaps:82/293 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SGD--LGPH------PHS----YGG-------PHPHHSVPHGPLPPG-----------------M 36
            :||  ||.|      |..    |||       .|.||..| ...||.                 .
Mosquito    83 NGDKSLGQHRKCSSTPEDFSALYGGLSGTPISDHHHHHTP-AHTPPNRLSDNGSVTAEGAFKKLK 146

  Fly    37 PMPSLGPFG--LPHGLEAVGFSQGMWGV-------------NTRKQRRERTTFTRAQLDVLEALF 86
            |.|:.||.|  :|.|:.:.|  .|:.|:             .|..:||.|||||:.||..|||.|
Mosquito   147 PEPNSGPLGSSVPGGISSPG--SGISGLPQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAF 209

  Fly    87 GKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCS 151
            .|:.||||:.|||:|....|.|:|:||||:|||||.|:|.:|.|::.:.|...         ||:
Mosquito   210 AKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIP---------SCN 265

  Fly   152 SSSANSRSNSNNNGSSSNNNTQSSGGNNSNK---------SSQKQGNSQS-SQQGGGSSGGNNSN 206
            ....|.:..|.:.|.....:.     |:.|:         :|...|.:|. |...|.:.|.....
Mosquito   266 GMMRNIQGYSVSRGYQPYPHP-----NSINRYPQDLFQMGASSYPGMTQPFSMTHGSNMGAVGVR 325

  Fly   207 NNSAAAAASAA---AAVAAAQSIKTHHSSFLSA 236
            .:|....|...   .:::|.:...:||.: |||
Mosquito   326 QDSMGMTAEDEWYNKSLSALRMNSSHHPN-LSA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 34/54 (63%)
LOC1273474XP_061506563.1 None

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