DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Arx

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_031518.2 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:462 Identity:106/462 - (22%)
Similarity:139/462 - (30%) Gaps:219/462 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAGFLKSGDLGP------HPHSYGGPHPHHSVPHGPLPPGMPMPSLGPFGLPHGLEAVGFSQGMW 60
            ||...:.|:|.|      ||....|.....||          ..|.|             |....
Mouse   282 AAVATEGGELSPKEELLLHPEDAEGKDGEDSV----------CLSAG-------------SDSEE 323

  Fly    61 GVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 125
            |:..|||||.|||||..||:.||..|.||.|||:|.|||:|::::|.|:||||||:|||||.|::
Mouse   324 GLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR 388

  Fly   126 LQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNS 190
                                                                       :|.| :
Mouse   389 -----------------------------------------------------------EKAG-A 393

  Fly   191 QSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSANNNSNN 255
            |:...|....|        ..:|....:....|.....||.:..||..||               
Mouse   394 QTHPPGLPFPG--------PLSATHPLSPYLDASPFPPHHPALDSAWTAA--------------- 435

  Fly   256 NNQGNSTPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVS-PVSIVCKKE 319
                                      |||||||.          |.||.|..|.| |.|      
Mouse   436 --------------------------AAAAAAAF----------PSLPPPPGSASLPPS------ 458

  Fly   320 HLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDLLRSPYDQLKDAGGDIGAGVHH 384
                                              |..:|:|..|               ||.|..
Mouse   459 ----------------------------------GAPLGLSTFL---------------GAAVFR 474

  Fly   385 HHSIYGSAAGSNPRLLQPGGNITPMDSSSS----ITTPSPPITPMSPQSAAAAAHAAQSAQSAHH 445
            |.:....|.|   ||.   ..:.|:.|:|:    :..|:|.:     :.|.|:...|..|.:|..
Mouse   475 HPAFISPAFG---RLF---STMAPLTSASTAAALLRQPTPAV-----EGAVASGALADPATAAAD 528

  Fly   446 SAAHSAA 452
            ..|.|.|
Mouse   529 RRASSIA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 35/54 (65%)
ArxNP_031518.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264
Homeodomain 331..387 CDD:459649 35/55 (64%)
OAR 528..546 CDD:461067 3/8 (38%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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