DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Phox2a

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_032913.1 Gene:Phox2a / 11859 MGIID:106633 Length:280 Species:Mus musculus


Alignment Length:378 Identity:94/378 - (24%)
Similarity:119/378 - (31%) Gaps:170/378 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HGPLPP-----GMPMPSLGP-----------------------FGLPHGLEAVGFSQGMWGVNTR 65
            :.||.|     |.|.|:||.                       |..|.||.           ..|
Mouse    35 YSPLRPAFPAAGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLH-----------EKR 88

  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQ 130
            ||||.|||||.|||..||.:|.:|.||||:.|||:||||:|.|:||||||:|||||.|:|     
Mouse    89 KQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQ----- 148

  Fly   131 QSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQ 195
                                                                             
Mouse   149 ----------------------------------------------------------------- 148

  Fly   196 GGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSANNNSNNNNQGN 260
                         ..||:|..||                 .|..|..|....|:.::.:..:..:
Mouse   149 -------------ERAASAKGAA-----------------GATGAKKGEARCSSEDDDSKESTCS 183

  Fly   261 STPNSSSSGGGGGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKK----EHL 321
            .||:|::|           |....|              |.|.:|..|.||:......    :.|
Mouse   184 PTPDSTAS-----------LPPPPA--------------PSLASPRLSPSPLPAALGSGPGPQPL 223

  Fly   322 SGGYGSSVGGGGGGGGASSGG--LNLGVGVGVGVGVGVGVSQDLLRSPYDQLK 372
            .|...:.|.||||||..:...  |........|.|...||.....|.|...||
Mouse   224 KGALWAGVAGGGGGGPGTGAAELLKAWQPAEPGPGPFSGVLSSFHRKPGPALK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 38/54 (70%)
Phox2aNP_032913.1 Homeodomain 91..147 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..244 32/223 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..280 6/17 (35%)

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