DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and Alx3

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_031467.1 Gene:Alx3 / 11694 MGIID:1277097 Length:343 Species:Mus musculus


Alignment Length:267 Identity:74/267 - (27%)
Similarity:103/267 - (38%) Gaps:108/267 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AAG-FLKSGDLGPHPHSY--GGPHPHHSVPH----------GPLPPGMPMPS---------LGPF 44
            ||| :..:||..|.|...  ..||.|.:.|.          |||.|.:|.|:         |||.
Mouse    14 AAGPYAAAGDEAPGPQGTPDAAPHLHPAPPRGPRLSRFPACGPLEPYLPEPAKPPAKYLQDLGPG 78

  Fly    45 GLPHG--------------LEAVGFSQ-------------------------------------G 58
            .:.:|              .:|..|.|                                     .
Mouse    79 PVLNGGHFYEGSAEAEEKASKAASFPQLPVDCRGGPRDGPSNVQASPGPCLASLSVPLSPGLPDS 143

  Fly    59 MWGVNTR-KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKC 122
            |....|: |:||.||||:..||:.||.:|.||.|||::.||::||:.:|.|:||||||:|||||.
Mouse   144 MELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKW 208

  Fly   123 RQ-----QLQQ--------------------QQQSNSL--SSSKNASGG-------GSGNSCSSS 153
            |:     ::|:                    .|..|||  |....:.||       |..:.|.|.
Mouse   209 RKRERYGKMQEGRNPFTTAYDISVLPRTDSHPQLQNSLWPSPGSGSPGGPCLMSPEGIPSPCMSP 273

  Fly   154 SANSRSN 160
            .::|..|
Mouse   274 YSHSHGN 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 33/54 (61%)
Alx3NP_031467.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..122 24/107 (22%)
Homeodomain 154..210 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..343
Blue background indicates that the domain is not in the aligned region.

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