DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and prop1

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_004914810.1 Gene:prop1 / 101734397 XenbaseID:XB-GENE-22068967 Length:242 Species:Xenopus tropicalis


Alignment Length:196 Identity:57/196 - (29%)
Similarity:90/196 - (45%) Gaps:31/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LPPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFM 96
            :||..|.|:                          :||.||||::.||:.||..|.|..||||:.
 Frog    57 MPPHYPTPT--------------------------RRRHRTTFSQEQLEHLETAFSKNHYPDIYC 95

  Fly    97 REEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNS 161
            |||:|....|.|:|:||||:|||||.|:. ::..|.:::.||....|......||.|..:.:...
 Frog    96 REELAKITKLNEARIQVWFQNRRAKHRKH-ERTTQKSTVPSSMLTCGSLMSGMCSMSPPSRQYQY 159

  Fly   162 NN--NGSSSNNNTQSSGGNNSNKSSQ--KQGNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAA 222
            .:  |.....::..|:|.:..:..||  ...|....|..|..|..::...||..:.:|..|.:::
 Frog   160 PHALNHIPRFSSMSSAGYHPPSAVSQFTCPSNHPHLQPAGPPSRQHDDWYNSLRSISSPGAGLSS 224

  Fly   223 A 223
            :
 Frog   225 S 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 32/54 (59%)
prop1XP_004914810.1 Homeodomain 73..123 CDD:459649 27/49 (55%)

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