DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and duxa

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_002941810.1 Gene:duxa / 100496651 XenbaseID:XB-GENE-22065713 Length:255 Species:Xenopus tropicalis


Alignment Length:127 Identity:39/127 - (30%)
Similarity:63/127 - (49%) Gaps:25/127 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINL 106
            |.|...||                |.||.||.:::..||:|.:.|.|..||.|.:||.::....:
 Frog    17 GSFNRLHG----------------KTRRRRTVYSQTHLDLLLSTFNKDPYPGITVRERLSQITGI 65

  Fly   107 PESRVQVWFKNRRA-KCRQQLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSN--SNNNG 165
            .|||:||||:|||| |.::.:|:::..:|.:.....      |:...::..|::.  |.|||
 Frog    66 HESRIQVWFQNRRARKNKKSVQERENVHSTNEWHQC------NTIFKTNTTSQAEWISKNNG 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 26/55 (47%)
duxaXP_002941810.1 homeodomain 27..85 CDD:238039 26/57 (46%)

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