DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and dmbx1

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_017949066.1 Gene:dmbx1 / 100493907 XenbaseID:XB-GENE-486746 Length:367 Species:Xenopus tropicalis


Alignment Length:299 Identity:87/299 - (29%)
Similarity:130/299 - (43%) Gaps:69/299 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PSLGPFGLPHGLEAVGFS----QGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREE 99
            ||:....|...|....|.    :..:|...|||||.||.||..||:.||..|.||.|||:.|||.
 Frog    39 PSVHALTLAERLAGCTFQDIILEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRER 103

  Fly   100 VALKINLPESRVQVWFKNRRAKCR--------QQLQQQQQSNSLSSSKNASGGGSGNSCSSSSAN 156
            :|:..||||:||||||||||||.|        :|||:|:.| .:|:|:..:.....:|.:|:..:
 Frog   104 LAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKDS-EVSNSEGKTESTPADSATSNQDS 167

  Fly   157 SRSNSNNNGSS-------SNNNTQSSGGN-----------------------------NSNKSSQ 185
            .:::|:.|.||       |..:...|...                             |..::|.
 Frog   168 KKAHSSVNDSSVELNLTLSEQSASESAAEEHTDKEEEPKTPKEEPKTEKNPIADTKPLNCKRASP 232

  Fly   186 KQGNSQSSQQGGGSSGGNNSNNNSAAAAASA-------AAAVAAAQSIKTHHSSF-LSAAAAAAS 242
            |..:..||.....||......::.:::..|.       ...:||..:: .|:||| :::..|...
 Frog   233 KTESPVSSTMTPSSSSCLTPTHSYSSSPLSLFRLQEQFRQHMAATNNL-VHYSSFDMASPPAVPY 296

  Fly   243 GGTN-----------QSANNNSNNNNQGNSTPNSSSSGG 270
            .|.|           ||...:.::..|..|:|...||||
 Frog   297 LGMNVSMAPLSSLHCQSYYQSLSHAQQVWSSPILQSSGG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 36/54 (67%)
dmbx1XP_017949066.1 Homeodomain 72..128 CDD:459649 36/55 (65%)

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