DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment oc and drgx

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_004915967.1 Gene:drgx / 100493837 XenbaseID:XB-GENE-993712 Length:263 Species:Xenopus tropicalis


Alignment Length:271 Identity:87/271 - (32%)
Similarity:117/271 - (43%) Gaps:56/271 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PPGMPMPSLGPFGLPHGLEAVGFSQGMWGVNTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMR 97
            ||.:.:.| .|||.....|   |..|..   .|||||.|||||..||:.|||:|.:|.|||:|.|
 Frog     7 PPQLEVGS-PPFGAHAASE---FDDGFL---RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTR 64

  Fly    98 EEVALKINLPESRVQVWFKNRRAKCRQ-QLQQQQQSNSLSSSKNASGGGSGNSCSSSSANSRSNS 161
            ||:|:||||.|:||||||:|||||.|: :....:|..:..|:...:..|...|.||:....|   
 Frog    65 EELAMKINLTEARVQVWFQNRRAKWRKTERGSCEQEGAKESAPEVTTAGRNLSPSSTVEPVR--- 126

  Fly   162 NNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGGGSS------GGNNSNNNSAAAAASAAAAV 220
                           |......:|::..|.....|..:|      .|...|..|.|.|.|..|::
 Frog   127 ---------------GKKETLEAQQRCLSHDRAVGSATSFFPSCLPGALLNTASYAQALSHVASL 176

  Fly   221 AAA---------------------QSIKTHHSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPN 264
            ..:                     ||.:|...:.|...|...|....|||....   :.||||..
 Frog   177 KGSPLCSCCVSDPLGLSFLPPYGCQSHRTASVAALRMKAREHSEAVLQSAQLLP---SAGNSTGA 238

  Fly   265 SSSSGGGGGSQ 275
            |:|:...||.:
 Frog   239 SASAPLEGGHE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 38/54 (70%)
drgxXP_004915967.1 Homeodomain 35..91 CDD:459649 38/55 (69%)
OAR 204..220 CDD:461067 3/15 (20%)

Return to query results.
Submit another query.