Protein Alignment oc and shox2

DIOPT Version :10

• Sequence 1: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Sequence 2: NP_001093694.1
• Gene: shox2 / 100101703
• XenbaseID: XB-GENE-480993
• Length: 311
• Species: Xenopus tropicalis
• Alignment Length: 197
• Identity: 67/197 - (34%)
• Similarity: 91/197 - (46%)
• Gaps: 35/197 - (17%)

  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQ 130
            ||||.||.||..||:.||.||.:|.|||.|||||::.::.|.|:||||||:|||||||      :
 Frog   119 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR------K 177

  Fly   131 QSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQ 195
            |.|.|........|....:|..:.      ..|.|:......|.|..|..:.|.|.|  :|....
 Frog   178 QENQLHKGVLIGAGSQFEACRVAP------YVNVGALRMPFQQDSHCNVPSLSFQVQ--AQLQLD 234

  Fly   196 GGGSSGGNNSNNNSAAAA--------------ASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTN 246
            ...:...::.:.:..|.|              |:.||..|.|.|:       ::|||||.:...|
 Frog   235 SAVAHAHHHLHPHLTAHAPYMMFPAPPFGLPLATLAAETATAASV-------VAAAAAAKTSSKN 292

  Fly   247 QS 248
            .|
 Frog   293 SS 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	34/54 (63%)
shox2	NP_001093694.1	Homeodomain	121..177	CDD:459649	36/61 (59%)
		OAR	292..307	CDD:461067	2/3 (67%)