DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and sia1

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001090821.1 Gene:sia1 / 100038038 XenbaseID:XB-GENE-482368 Length:240 Species:Xenopus tropicalis


Alignment Length:79 Identity:27/79 - (34%)
Similarity:39/79 - (49%) Gaps:5/79 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 RERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSN 133
            |.||.:::.|...|:..|....|||...|..:|....:||.|:||||:||||:     ...:.:.
 Frog   138 RRRTIYSKEQTHFLQNQFDLNPYPDFVNRCRIAKITAIPEPRIQVWFQNRRAR-----HLPRAAT 197

  Fly   134 SLSSSKNASGGGSG 147
            |||..:....|..|
 Frog   198 SLSPQERKPPGSVG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 22/53 (42%)
sia1NP_001090821.1 Homeodomain 138..191 CDD:459649 22/57 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..240 5/19 (26%)

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