DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or65c and Orco

DIOPT Version :10

Sequence 1:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:469 Identity:82/469 - (17%)
Similarity:169/469 - (36%) Gaps:151/469 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 YRSSWHTLVIIQATVCFLTMCYG---VTESLGDKVQMGRDIAFIIGFFYIAF--KIYYFQWYGDE 115
            |.|.....:::|.|...:.|...   |.|..|:.:........|..|.|:|.  |.:|       
  Fly    45 YSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCITKFIYLAVNQKNFY------- 102

  Fly   116 LDEVVEALETFHPWAQKGPGAVDYRTAKRWY-FTLA-----FFL--------ASSW--LVFLCIF 164
                    .|.:.|.|.....:...:..|:: ..||     |||        |::|  :.|....
  Fly   103 --------RTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDS 159

  Fly   165 ILLLI----TSPLWVHQQILPLHAAFPFQWHEKSIHPISHAFIYL----FQTWNVMY-------- 213
            :.:::    .|.:.|....||:.:.:|  |:      .||...|:    ||.:.|::        
  Fly   160 VKMVVDHETNSSIPVEIPRLPIKSFYP--WN------ASHGMFYMISFAFQIYYVLFSMIHSNLC 216

  Fly   214 ---FLTWLV--C-----IEGLSVSIYVEITFAIEVL---------------CLELRHLHQRCHGY 253
               |.:||:  |     ::|:...: :|::.:::..               ..||.|..::..|.
  Fly   217 DVMFCSWLIFACEQLQHLKGIMKPL-MELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGT 280

  Fly   254 E---------------------------------------------------QLRLETNRLVQFH 267
            :                                                   .:|......|:.|
  Fly   281 DMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERH 345

  Fly   268 QKIVHILDHTNKVFHGTLIMQMGVNFFLVSLSVLEAMEARKDPKV-VAQFAVLMLL--ALGHLSM 329
            :.:|.::......:...|::.|..:  .:.|::| |.:|.|...| |..|.|:..|  ||..:..
  Fly   346 KHVVRLVAAIGDTYGAALLLHMLTS--TIKLTLL-AYQATKINGVNVYAFTVVGYLGYALAQVFH 407

  Fly   330 WSYFGDLLSQKSLTISEAAYEA--YDPIKGSKDVYRDLCLIIRRGQEPLIMRASPFPSFNFINYS 392
            :..||:.|.::|.::.||||..  ||   ||::....:.::.::.|:.:.:..:.|.:.:...::
  Fly   408 FCIFGNRLIEESSSVMEAAYSCHWYD---GSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFA 469

  Fly   393 AILNQCYGILTFLL 406
            ::|.   .::|:.:
  Fly   470 SVLG---AVVTYFM 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 73/426 (17%)
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 75/431 (17%)

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