DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or65c and Orco

DIOPT Version :9

Sequence 1:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:469 Identity:82/469 - (17%)
Similarity:169/469 - (36%) Gaps:151/469 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 YRSSWHTLVIIQATVCFLTMCYG---VTESLGDKVQMGRDIAFIIGFFYIAF--KIYYFQWYGDE 115
            |.|.....:::|.|...:.|...   |.|..|:.:........|..|.|:|.  |.:|       
  Fly    45 YSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCITKFIYLAVNQKNFY------- 102

  Fly   116 LDEVVEALETFHPWAQKGPGAVDYRTAKRWY-FTLA-----FFL--------ASSW--LVFLCIF 164
                    .|.:.|.|.....:...:..|:: ..||     |||        |::|  :.|....
  Fly   103 --------RTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDS 159

  Fly   165 ILLLI----TSPLWVHQQILPLHAAFPFQWHEKSIHPISHAFIYL----FQTWNVMY-------- 213
            :.:::    .|.:.|....||:.:.:|  |:      .||...|:    ||.:.|::        
  Fly   160 VKMVVDHETNSSIPVEIPRLPIKSFYP--WN------ASHGMFYMISFAFQIYYVLFSMIHSNLC 216

  Fly   214 ---FLTWLV--C-----IEGLSVSIYVEITFAIEVL---------------CLELRHLHQRCHGY 253
               |.:||:  |     ::|:...: :|::.:::..               ..||.|..::..|.
  Fly   217 DVMFCSWLIFACEQLQHLKGIMKPL-MELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGT 280

  Fly   254 E---------------------------------------------------QLRLETNRLVQFH 267
            :                                                   .:|......|:.|
  Fly   281 DMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERH 345

  Fly   268 QKIVHILDHTNKVFHGTLIMQMGVNFFLVSLSVLEAMEARKDPKV-VAQFAVLMLL--ALGHLSM 329
            :.:|.::......:...|::.|..:  .:.|::| |.:|.|...| |..|.|:..|  ||..:..
  Fly   346 KHVVRLVAAIGDTYGAALLLHMLTS--TIKLTLL-AYQATKINGVNVYAFTVVGYLGYALAQVFH 407

  Fly   330 WSYFGDLLSQKSLTISEAAYEA--YDPIKGSKDVYRDLCLIIRRGQEPLIMRASPFPSFNFINYS 392
            :..||:.|.::|.::.||||..  ||   ||::....:.::.::.|:.:.:..:.|.:.:...::
  Fly   408 FCIFGNRLIEESSSVMEAAYSCHWYD---GSEEAKTFVQIVCQQCQKAMSISGAKFFTVSLDLFA 469

  Fly   393 AILNQCYGILTFLL 406
            ::|.   .::|:.:
  Fly   470 SVLG---AVVTYFM 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 73/426 (17%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 75/431 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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