DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or65c and Or56a

DIOPT Version :9

Sequence 1:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:427 Identity:81/427 - (18%)
Similarity:153/427 - (35%) Gaps:118/427 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FRDPTMESSYSAVYYWREQMKAMFLYTTSKERQMPYRSSWHTLVIIQATV--------CFLTMC- 76
            |.||.. .::...:.|       :.|..||::..|      .|.:|:.|:        |.|.:. 
  Fly    14 FEDPIF-GTHLRYFQW-------YGYVASKDQNRP------LLSLIRCTILTASIWLSCALMLAR 64

  Fly    77 -YGVTESLGDKVQMGRDIAFIIGFFYIAFKIYYFQWYGDELDEVVEALETFHPWAQKGPGAVDYR 140
             :...|:|.|..     .::.....|.|..|..|..| .:.|:|:..|...|...|......|.|
  Fly    65 VFRGYENLNDGA-----TSYATAVQYFAVSIAMFNAY-VQRDKVISLLRVAHSDIQNLMHEADNR 123

  Fly   141 TAKRWYFTLAFFLASSWLVFLCIFILLLITSPLWVHQQI-LPLHAAFPFQWHEKSI--------- 195
            ..:....|.|:....:.|:::...|..|:.....:::.: ||           ||:         
  Fly   124 EMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLP-----------KSVFNVPAVRRG 177

  Fly   196 --HPISHAFIYLFQ---------TWNVMYFLTWLVCIEGLSVSI----YVEITFAIEVLCLELRH 245
              ||     |.|||         .:.|.|...|...  ||.::.    :..||..::.:.|:|:.
  Fly   178 EEHP-----ILLFQLFPFGELCDNFVVGYLGPWYAL--GLGITAIPLWHTFITCLMKYVNLKLQI 235

  Fly   246 LHQRCHGYEQLRL---------------------------ETNRLVQFHQKIVHILDHTNKVFHG 283
            |::|....:..||                           |..|:.:|.|::.:::  ...|...
  Fly   236 LNKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLI--CVPVMAD 298

  Fly   284 TLIMQMGVNFFLVSLSVLEAMEARKDPKVVAQFAVLMLLALGHLSMWSYFGDLL----SQKSLTI 344
            .:|..:.:.|...:|:|  .:.::.|  ....|..|.::| |.|.::.:...|:    .:.||..
  Fly   299 FIIFSVLICFLFFALTV--GVPSKMD--YFFMFIYLFVMA-GILWIYHWHATLIVECHDELSLAY 358

  Fly   345 SEAAYEAYD-PIKGSKDVYRDLCLIIRRGQEPLIMRA 380
            ....:..:: |::      :.|..::...|.|:.|||
  Fly   359 FSCGWYNFEMPLQ------KMLVFMMMHAQRPMKMRA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 65/351 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 53/295 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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