DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or65c and Or42a

DIOPT Version :9

Sequence 1:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:404 Identity:80/404 - (19%)
Similarity:148/404 - (36%) Gaps:107/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LYTTSKERQMPYRSSWHTLVIIQATVCFLTMCYGVTESLGDKVQMGRDIAFIIGFFYIAFKIYYF 109
            |||.||:  .|.||...||.:::   |...|  ||.     |......:|:::..|.:.|...::
  Fly    10 LYTQSKD--SPVRSRDATLYLLR---CVFLM--GVR-----KPPAKFFVAYVLWSFALNFCSTFY 62

  Fly   110 QWYG---------DELD--EVVEALE-TFHPWAQKGPGAVDYRTAKR------------------ 144
            |..|         .|..  |.:.:|: .|:.|:......:.:...||                  
  Fly    63 QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDP 127

  Fly   145 ----------------WYFTLAFFLASSWLVFLCIFILLLITSPLWVHQQILPLHAAFPF-QWHE 192
                            ::|.:|.::..:...||.   .:.|..|        |....:|| .|..
  Fly   128 GERLQIHRAVSLSNRIFFFFMAVYMVYATNTFLS---AIFIGRP--------PYQNYYPFLDWRS 181

  Fly   193 KSIHPISHAFIYLFQTWNVMYFLTWLVCIEGLSVSIYVEITFAI------EVLCLELRHLHQRCH 251
            .::|....|        .:.||.....|.:.:.|..| .:.|.:      .:....||.|  ..:
  Fly   182 STLHLALQA--------GLEYFAMAGACFQDVCVDCY-PVNFVLVLRAHMSIFAERLRRL--GTY 235

  Fly   252 GYEQLRLETNRLVQF---HQKIVHILDHTNKVFHGTLIMQ-----MGVNFFLVSLSVLEAMEARK 308
            .||....:..||||.   |:.|:..:|....|..||:.:|     :.:.|.|::: ||.|     
  Fly   236 PYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINI-VLFA----- 294

  Fly   309 DPKVVAQFAVLMLLA--LGHLSMWSYFGDLLSQKSLTISEAAYEAYDPIKGSKDVYRDLCLIIRR 371
              .:.:..|.|..:|  |...:.:....:.|::....:::|.::: :.|...|...:.|...:::
  Fly   295 --NLGSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQS-NWIDEEKRYQKTLMYFLQK 356

  Fly   372 GQEPL-IMRASPFP 384
            .|:|: .|..:.||
  Fly   357 LQQPITFMAMNVFP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 65/362 (18%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 59/323 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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