DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or65c and Or1a

DIOPT Version :9

Sequence 1:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:374 Identity:59/374 - (15%)
Similarity:136/374 - (36%) Gaps:84/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TVCF--------LTMCYGVTESLGDKVQMGRDIAFIIGFFYIAFKIYYFQWYGDELDEVVEALET 125
            |||.        :.:|   :|:|...:||...:          .|:..|.....:|.::::.:::
  Fly    54 TVCAFMVQNRNQIVLC---SEALMHGLQMVSSL----------LKMAIFLAKSHDLVDLIQQIQS 105

  Fly   126 FHPWAQKGPGAVDYRTAKR-------WYFTLAFFLASSWLVFLCIFILLLITS-----PLWVHQQ 178
              |:.::.....::|:..:       .||.:....:.|:|:......:|...|     |:...:.
  Fly   106 --PFTEEDLVGTEWRSQNQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRV 168

  Fly   179 ILPLHAAFPFQWHEKSIHPISHAFIYLFQTWNVMYFLTWLVCIEGLSVSIYVEITFAIEVLCLEL 243
            :||              :.::...:|......:::.|::..|......::|......:.   |:.
  Fly   169 LLP--------------YDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVS---LQY 216

  Fly   244 RHLHQR------CHGYEQLRLETNRLVQFHQKIVHILDHTNKVFHGTLIMQM----GVNFFLVSL 298
            |.|.|:      |....:.....:.:...|.:::.|:.|.|..|.....:::    |:...::..
  Fly   217 RRLGQQLKRIPSCFNPSRSDFGLSGIFVEHARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQ 281

  Fly   299 SVLEAMEARKDPKVVAQFAVL---MLLALGHLSMWSYFGDLLSQKSLTISEAAYEAYDPIKGSKD 360
            .::        |.....||.|   .|:....|.::.:..:.:..::...|...||.. |.:....
  Fly   282 YIM--------PHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEVI-PWQNLPP 337

  Fly   361 VYRDLCLI-IRRGQEPLIMRASPF----PSFNFI-----NYSAILNQCY 399
            .:|.|.|. |.|.|...::.|..|    |...:|     :::.::|..|
  Fly   338 KHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLMNALY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 52/346 (15%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 50/334 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465079
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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