DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or65b and Or13a

DIOPT Version :9

Sequence 1:NP_729162.3 Gene:Or65b / 318012 FlyBaseID:FBgn0041624 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:445 Identity:97/445 - (21%)
Similarity:165/445 - (37%) Gaps:127/445 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PLMEASHSSIYYWREQMKAMALFTTTEERLLPYRSKWHTLVYIQMVIFFASMSFGLTESMGDHVQ 84
            ||.|:|..    ||.|    :|..|               .|| :..::...|.|:|.|.     
  Fly    26 PLTESSRP----WRSQ----SLLAT---------------AYI-VWAWYVIASVGITISY----- 61

  Fly    85 MGRDLAFILGAFF-IIFKTYYFC--WYGDELDQVISDLDALH---------------------PW 125
               ..||:|.... ||..|...|  :.|     |::.:..:|                     |.
  Fly    62 ---QTAFLLNNLSDIIITTENCCTTFMG-----VLNFVRLIHLRLNQRKFRQLIENFSYEIWIPN 118

  Fly   126 AQKGPNPVEYQTGKRWYFVMAFFLATSWSFFL----CILLLLLITSPMWVHQQNLPF--HAAFPF 184
            :.|  |.|..:..:|   ::.|.:.||....|    |:|.|:.|........||.||  ...||:
  Fly   119 SSK--NNVAAECRRR---MVTFSIMTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPY 178

  Fly   185 ----QWHEKSLHPISHAIIYLFQSYFAVYCLTWLLCIEGLSICIYAEIT---FGIEVLCLELRQI 242
                .|       |.:.:.|:|.||..:..:|.|          :||.|   |.|...|.:...:
  Fly   179 DAQSSW-------IRYVMTYIFTSYAGICVVTTL----------FAEDTILGFFITYTCGQFHLL 226

  Fly   243 HRHNYGL---------QELRME-TNRLVKLHQKIVEILDRTNDVFHGTLIMQMGVNFSLVSLSVL 297
            |:...||         :.:::| ..|:|:.|..|:....|..|.|:..|:..:.::..|:.:...
  Fly   227 HQRIAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGF 291

  Fly   298 EAVEARK----DPKVVAQFAVLMLLALGHLSMWSYCGDQLSQKSLQISEAAYE------------ 346
            :.|..:.    |   ..:|.:.:..||..|.:....||.|.::|...::..||            
  Fly   292 QIVTGKNMFIGD---YVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQ 353

  Fly   347 AYDPTKGSKDVYRDLCVIIRRGQDPLIMRASPFPSFNLINYSAILNQCYGILTFL 401
            ::.||  :|.:...:..:|...|.|:.:.|..|.:.:|.:::|||:......|.|
  Fly   354 SFTPT--TKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65bNP_729162.3 7tm_6 83..395 CDD:251636 80/374 (21%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 74/352 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465408
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.