DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or65b and Or2a

DIOPT Version :10

Sequence 1:NP_729162.3 Gene:Or65b / 318012 FlyBaseID:FBgn0041624 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster


Alignment Length:457 Identity:85/457 - (18%)
Similarity:160/457 - (35%) Gaps:150/457 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SHSSIYY-WREQMKAMALFTTTEERLLPYRSKWHTLVY---IQMVI------------FFASMSF 73
            :||::|| ||       ::..|.....|..|....:||   :.:|:            .|.:...
  Fly    11 THSAVYYHWR-------VWELTGLMRPPGVSSLLYVVYSITVNLVVTVLFPLSLLARLLFTTNMA 68

  Fly    74 GLTESMGDHV-QMGRDLAFILGAFFIIFKTYYFCWYGDELDQVISDLDALHPWAQKGPNPVEYQT 137
            ||.|::...: .:..:|.|  ...:::.|         :|.::.|.|..:...|:...:|.|...
  Fly    69 GLCENLTITITDIVANLKF--ANVYMVRK---------QLHEIRSLLRLMDARARLVGDPEEISA 122

  Fly   138 ---------GKRWYFVMAFFLATSWSFFLCILLLLLITSPMWVHQQNLPFHAAFPFQWHEKSLHP 193
                     |....|...|...|:.|   |:   .::..|    .:.|.:.|.|...|    :|.
  Fly   123 LRKEVNIAQGTFRTFASIFVFGTTLS---CV---RVVVRP----DRELLYPAWFGVDW----MHS 173

  Fly   194 I-SHAIIYLFQSYFAVYCLTWLLCIEGLSICIYAEITFGIEVLC--------LELR------QIH 243
            . ::.:|.::|.:.        |.::.:..|  |..::....||        ||||      :..
  Fly   174 TRNYVLINIYQLFG--------LIVQAIQNC--ASDSYPPAFLCLLTGHMRALELRVRRIGCRTE 228

  Fly   244 RHNYG----------LQELRMETNRLVKLHQKIVEILDR-------------------------- 272
            :.|.|          .|||......|.::| ::.||:.|                          
  Fly   229 KSNKGQTYEAWREEVYQELIECIRDLARVH-RLREIIQRVLSVPCMAQFVCSAAVQCTVAMHFLY 292

  Fly   273 -TNDVFHGTLIMQMGVNFSLVSLSVLEAVEARKDPKVVAQFAVLMLLALGHLSMWSYCGDQLSQK 336
             .:|..|..:|:.: |.||.|:|.|               |.:            .|.||::..:
  Fly   293 VADDHDHTAMIISI-VFFSAVTLEV---------------FVI------------CYFGDRMRTQ 329

  Fly   337 SLQISEAAYEAYDPTKGSKDVYRDLCVIIRRGQDPLIMRASPFPSFNLINYSAILNQCYGILTFL 401
            |..:.:|.|:. :..:......|:|...:.|.|.|.::.|..:.:.:|..:..::...|.:.|.|
  Fly   330 SEALCDAFYDC-NWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALSLETFEQVMRFTYSVFTLL 393

  Fly   402 LK 403
            |:
  Fly   394 LR 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or65bNP_729162.3 7tm_6 83..395 CDD:251636 65/373 (17%)
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 68/385 (18%)

Return to query results.
Submit another query.