DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Caf1-180 and chaf1a

DIOPT Version :10

Sequence 1:NP_572495.1 Gene:Caf1-180 / 31801 FlyBaseID:FBgn0030054 Length:1183 Species:Drosophila melanogaster
Sequence 2:XP_073792717.1 Gene:chaf1a / 563212 ZFINID:ZDB-GENE-030131-5366 Length:863 Species:Danio rerio


Alignment Length:903 Identity:260/903 - (28%)
Similarity:420/903 - (46%) Gaps:219/903 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 AEQNKKNDQATIDLFMGKKMETNKKDKPEVKTTAKDNKKDPLIAEDSKPKEVPKKETSKT----- 343
            |..|||..||.:..   |::....|:..|.|.|     |.|:..:.|:|.:....:.|.:     
Zfish    28 ANTNKKLVQARLPF---KRLNPEPKECNEPKRT-----KGPVAPKCSEPSDQENDQDSSSISHHG 84

  Fly   344 ----GGKG---------KKEGAKPAEKSKKEEKEDSTTKSKKE-----KADSPANNQKEQQIGVK 390
                .|:|         |:...:.|.::..:..|||...:|::     .|..|.:.:       |
Zfish    85 PALVNGRGPLDCFMSRRKRSPLRSAPEATIDLTEDSNDSAKQQPAPPIAATCPLSEE-------K 142

  Fly   391 KKTSEPEDASNSHKSVTAKKDSKKDEA---------------STQVKSDNESPEAAEIS----MI 436
            .||||....|........:::::||||               .|:.:.:.|..:.||:|    .:
Zfish   143 TKTSEGTTESTEPTIPLTEEETEKDEAEDVDALPLLDITQDSDTEEEEEEEEQQEAEVSHGNESV 207

  Fly   437 LSTSEANS-----SSSEHEMDADTDTAATDR-PSAQKETRLNRKSLPEVTGAPKGLTPKQQRLME 495
            |||...:|     ||.|....|.|..|:|.| .:|.|..|.:.||:.|        ..::||..:
Zfish   208 LSTGSTSSASVIASSPEPSKSAPTTPASTSRINAANKVKRRSLKSVQE--------QEEKQRQRD 264

  Fly   496 QRKKAREE----KEQKLAEERRLKQQDKEHREQQKKQERDEKEQQRKLERDQKEQQRKMEKEEKE 556
            ::::.::|    ||:|..|.|::|::  :.||:::|:|:||||::.|.|||:||:..|:  :.||
Zfish   265 EKERLKQEAKAAKEKKKEEARKMKEE--KEREKKEKKEKDEKERREKKERDEKEKADKL--KAKE 325

  Fly   557 RKRQAEVDSKNEEKRKRNEAKEEVQRKKDEERRKKEQEREEAEQKKKRAAESFSKFFVPKQPKCG 621
            .:||.::::|.|||||          |::|:|.|:|::|.:||:.:      .::|.  ::||  
Zfish   326 EQRQMKIEAKLEEKRK----------KEEEKRLKEEKDRIKAEKAE------ITRFL--QKPK-- 370

  Fly   622 SGSNNTSYLEHEQSSCDSSKASSQTLA-----FRPFQIKDDMLLAPIVRNSLGQEQRSQLDGLFR 681
                              ::.:.:|||     |.||:||..|.|||:.|   .|.:.|.|:.|.|
Zfish   371 ------------------TQLAPKTLASACGKFAPFEIKAHMSLAPLTR---VQCEDSVLEDLDR 414

  Fly   682 HRDEEADDEEEEEEQDIVRRKPPNRANLYLSELSSGRRKPL-KMQRDVKLQRRTKDEEDDDDVQV 745
            :..:  .|......:|....||          .|||..:|. ..|.|..:  .|:.::.||.   
Zfish   415 YLAQ--PDSTLNGLKDWTGHKP----------RSSGPTRPRHSAQGDCVV--ITESQKADDG--- 462

  Fly   746 IDYLSPAGLPIEVEQPKQLTRMKAKYLHFADNRRPPYYGTWRKKSSSISARRPLAQDKVLFDYEV 810
                           |.:....:.|.|||.||.||.|:|||.|||:.||.|.||..||.|.||||
Zfish   463 ---------------PDRSRYGRMKLLHFHDNYRPAYWGTWSKKSTHISPRCPLRLDKDLLDYEV 512

  Fly   811 DSDCEWEEEEPGESLSASEDEKEKESEEESEEEYNEWYVPHGHLSDEELQNDGDGM---EDGHTR 872
            |||.||||||||||||.||.:.:.|:.|:.::: :.::||||:||      :|:|.   |:|...
Zfish   513 DSDEEWEEEEPGESLSHSEGDDDDEAGEDDDDD-DGFFVPHGYLS------EGEGALEDEEGGDP 570

  Fly   873 EAQKAKLQVLQQEFAQEM--KKQTKKIKARLLGPVWLDENGNKSELFPAIFAHTIDMYACWQVEP 935
            |.||.:.::..:|:..|:  |.:.|.::|.:.|..|..|......|.|         ||...:||
Zfish   571 EKQKVRQRMKAREWENELMSKGKVKVLEAVVRGCFWEGEKPLPDFLQP---------YAVCMLEP 626

  Fly   936 LSLEPPPEPERQDQTPEQPVPLQLDDRLMQQLVRLTHGNRNSKTFLINEYLEYLKTQATAEANQT 1000
            ||.:....|| ||.:.:     |.:::|:..|:.|.|||.||...:|.|:||:.:       .||
Zfish   627 LSKDEASTPE-QDASRQ-----QRNEKLLTMLLPLLHGNVNSNKVIITEFLEFCR-------QQT 678

  Fly  1001 TLPSKAVLREKFDELASWKTVELSTPE---AAAASANSAKKGRKPKKRLCWVVASDMLEKFQLPD 1062
            :.|::::|          .|.|...|.   ......|:..:.|...||.||.|.:|:|.::....
Zfish   679 SSPTESLL----------NTTESIPPRIHVRRIIKENAVYEKRSTFKRCCWYVHADVLARYSQEA 733

  Fly  1063 LQLQNQWNYTLTPKVSDGPDAAQQEQSPPADAVPAASPASNQTTNSAPTTPISGQTQA 1120
            |.:..||:|     ::.|.:..:.|.|        .|..::.||||: |||.:.:..|
Zfish   734 LPVPCQWSY-----LTSGANVTRDEHS--------GSQGNSPTTNSS-TTPSNKRKSA 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-180NP_572495.1 PTZ00121 <131..603 CDD:173412 101/370 (27%)
CAF1A 770..>813 CDD:463507 28/42 (67%)
CAF1-p150_C2 947..>1127 CDD:434777 47/177 (27%)
chaf1aXP_073792717.1 None

Return to query results.
Submit another query.